DatasetT11b high vs low squamous_GSEA_Ranked
PhenotypeNoPhenotypeAvailable
Upregulated in classna_neg
GeneSetHALLMARK_KRAS_SIGNALING_DN
Enrichment Score (ES)-0.26090243
Normalized Enrichment Score (NES)-1.2557131
Nominal p-value0.16744186
FDR q-value0.5739127
FWER p-Value0.993
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_KRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Sprr3992.1730.0186No
2Slc6a141421.8680.0453No
3Krt42061.5810.0610No
4Krt132351.4800.0835No
5Pkp12571.4340.1067No
6Tgm12921.3370.1248No
7Alox12b3051.2760.1471No
8Lypd33891.0800.1480No
9Serpinb25270.8730.1315No
10Slc29a36000.7730.1290No
11Krt57090.6610.1155No
12Lgals77800.6010.1101No
13Tgfb28000.5930.1171No
14Kmt2d1293-0.5540.0066No
15Gtf3c51528-0.599-0.0393No
16Selenop2054-0.707-0.1550No
17Fggy2369-0.779-0.2171No
18Mfsd62379-0.784-0.2038No
19Sgk12539-0.829-0.2266No
20Nr6a12617-0.854-0.2287No
21Prodh2664-0.864-0.2229No
22Sidt12815-0.910-0.2419Yes
23Fgfr32850-0.925-0.2320Yes
24Camk1d2895-0.938-0.2243Yes
25Nr4a22921-0.946-0.2117Yes
26Asb72954-0.957-0.2006Yes
27Cyp39a13040-0.990-0.2020Yes
28Thrb3105-1.020-0.1976Yes
29Coq8a3108-1.021-0.1778Yes
30Cdkal13147-1.037-0.1667Yes
31Msh53214-1.072-0.1617Yes
32Synpo3604-1.290-0.2323Yes
33Copz23721-1.407-0.2330Yes
34Gprc5c3776-1.464-0.2173Yes
35Prkn3834-1.575-0.2002Yes
36Dtnb3928-1.771-0.1881Yes
37Tfcp2l13955-1.839-0.1581Yes
38Tent5c3985-2.032-0.1250Yes
39Tff23999-2.109-0.0864Yes
40Krt154063-2.644-0.0495Yes
41Clps4075-2.8120.0035Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_KRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for HALLMARK_KRAS_SIGNALING_DN